Module 1.2 Introduction to Linux and Bash (outline)
Theme 1: Getting started with bioinformatics
Getting started with the Command-line and bash
Time | Activity description | ILOs |
13:00-13:20
| Short talk: “Command-line introduction“ | · Navigate the terminal and use basic commands · Use command line to explore data · Understand the importance of file/folder structure · Write a basic bash-script and execute it |
13:20-14:20
| Practical: “Getting started with the command-line” | |
14.30-14.45
| Short talk: “Bash Introduction” | |
14.45-16.30 | Practical: “Getting started with Bash” |
Details
During this module, the course participants will get introduced to the world of programming and working from the command-line. They will gain proficiency in navigating folders and examining data, while also acquiring fundamental skills in bash scripting. Bash, a crucial tool in bioinformatics, aids in task management and script deployment. Furthermore, participants will understand the significance of maintaining a well-organized folder structure and comprehensive documentation.